Quantitative Image Calibration
It is a normal run of data collection: You've
acquired 600 images with your CCD camera. But there's something
ominous yet to be done before your data are really
useful: quantitative image calibration. This procedure
involves correction of instrumental signatures and
effects like bias, dark, and flat field corrections,
removal of defective pixels and artifacts, and other tasks.
And add to this complexity the fact that different data sources often
require different calibration steps and strategies, and
that some data sets require master calibration
frames to be created each time. With all the details and
endless variations, quantitative image calibration once
boiled down to these options: 1) perform hours of
tedious, error-prone work, or 2) invest the time to
create and refine a complicated script for each data
source. Now, Mira breaks through this complexity by reducing it to a
matter of checkboxes, buttons, and re-usable profiles.
This feature is included in the Mira MX, Pro, and AP
platforms.
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"...one click calibration... Its
wonderful!... the procedure-method-source file approach
is brilliant." —
Dr. David
Erickson, Senior Scientist in optics R&D.
Unlike other implementations, Mira
organizes a wealth of sophisticated calibration techniques into a
logically designed GUI that realizes your workflow in a
single-click procedure. And it saves all parameters for
future use as a "profile". You can have any number of
profiles and you can select one for use or modify it at
any time. A calibration procedure is infinitely
variable, ranging from a single step such as creation of
a library of master darks, up to a full pipeline
containing every processing step—all
available at the click of a button. Better still, Mira
gives you this power without presenting you with a spider's web of text based
scripts or an endless list of parameters to be setup
each time.
No other calibration
software offers Mira's unique
blend of sophistication, versatility, and ease of
use for doing automated image calibration.
Detailed Feature
List >>
About Image Calibration
Image data from CCD's and similar
detectors require elaborate and exact processing to
quantitatively calibrate the pixel response into
numerically valuable information. To this end, Mira includes a
superior image calibration tool which is arguably the
best of its kind. Using this tool, a Mira user can easily setup a processing pipeline that applies
anything from a single calibration step to a complete
1-click pipeline that handles everything between raw data
and fully calibrated results, including the creation and
application of master
calibration frames. The term "pipeline" refers to a
process in which the output of one step feeds input to
the next step of processing.
Any good experimental design requires
isolation of variables. Similarly, to calibrate image
data requires the
acquisition of calibration frames that contain each of
the effects to be removed. But the effects are
entangled, so the raw calibration frames
must themselves be calibrated using the same methods
that will be used for your science data. The
sequential creation and application of these master
frames and techniques to themselves and then to the data
frames creates a hierarchical process that isolates and
removes each of the undesirable effects in turn. The Mira Image Calibration
tool makes short order of this entire, complex
calibration process. The same Calibration tool is included
in the different Mira platforms, but the specific
methods
and options vary.
Key Features
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Broad collection of processing methods provides
all the tools necessary for complete calibration of CCD camera data
in most applications.
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Visually organized in an intuitive way using a
single dialog with tabbed pages that detail the procedure, methods,
parameters, and source files to be used.
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Perform any combination of calibration steps
ranging from a single step to all available steps including creation
and application of the standard corrections.
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Handles complete quantitative image calibration of
a folder of CCD camera data with only a single button click.
Sample Calibration Pages
Below are shown 3 sample pages from an Image
Calibration profile used to fully calibrate a folder of image
data. (Note: The Column Bias method described below is available in Mira MX and Mira Pro.)
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This picture shows a procedure used to perform a full
calibration. The selected steps create and apply Bias, Dark, and Flat
field corrections to a folder of science data. Scrolled outside
the procedure box are checked steps to use a column bias
correction plus a master bias frame, master dark frames, and
master flats. The selected steps are configured under the
Methods tab, as shown in the next picture.
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Each step of the calibration pipeline has its own configuration
page under the Methods tab.
This page configures the column bias correction using bias
overscan columns. The picture above shows the Trim step
selected; this is used as the final processing step to remove
the bias overscan columns from the image.
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To create a master calibration frame from raw images in a folder,
Mira needs to know how to identify the raw images. Since this
profile creates a library of master dark frames, it must know
which images are raw dark frames. This picture shows dark frames
being selected in a standard way, using the header keyword
IMAGETYP = 'dark'.
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Performing Image Calibration
The Image Calibration command organizes some 430
parameters in a logical fashion using a procedural approach and a dialog
interface. With it, you can perform anything
between a single operation and a complex pipeline procedure for complete
calibration of a raw data set. The entire profile description is stored as a "profile", or named
parameter set.
To run an existing profile, you select it from the list and Mira loads
it. Change some parameters if needed, then click "Run" to execute
the procedure.
Changing and creating profiles is easy—simply tell Mira what
you want to do and how to do it, then save the profile if you want to
use it again. Images from different cameras or data sources around the
world typically require different calibration procedures. Handling this
complexity is one area where Mira's Image Calibration capability really
shines. There is no limit to the number of different image calibration
procedures you can create and re-use with a click of the mouse.
Related Topics Image
Calibration Features
Pro Script module |